ovrlpy.plot_region_of_interest ============================== .. py:function:: ovrlpy.plot_region_of_interest(x, y, coordinate_df, visualizer, integrity_map, signal_map, window_size = 30, signal_plot_threshold = 5.0, rasterized = True, scalebar = SCALEBAR_PARAMS) Plot a comprehensive overview of a zoomed-in region of interest. :param x: x coordinate of the region of interest :type x: float :param y: y coordinate of the region of interest :type y: float :param coordinate_df: DataFrame of gene-annotated molecule coordinates :type coordinate_df: pandas.DataFrame :param visualizer: Visualizer object containing the fitted model :type visualizer: Visualizer :param integrity_map: integrity map of the tissue :type integrity_map: numpy.ndarray :param signal_map: Signal map of the tissue :type signal_map: numpy.ndarray :param window_size: Size of the window to display. Defaults to 30. :type window_size: int, optional :param signal_plot_threshold: Threshold for the signal plot. Defaults to 5. :type signal_plot_threshold: float, optional :param rasterized: If True all plots will be rasterized. Defaults to True. :type rasterized: bool, optional :param scalebar: If `None` no scalebar will be plotted. Otherwise a dictionary with additional kwargs for ``matplotlib_scalebar.scalebar.ScaleBar``. By default :py:attr:`ovrlpy.SCALEBAR_PARAMS` :type scalebar: dict[str, typing.Any] | None