ovrlpy.io.read_MERFISH ====================== .. py:function:: ovrlpy.io.read_MERFISH(filepath, z_scale = 1.5, *, remove_genes = MERFISH_CTRLS) Read a Vizgen transcripts file. :param filepath: Path to the Vizgen transcripts file. :type filepath: os.PathLike or str :param z_scale: Factor to scale z-plane index to um, i.e. distance between z-planes. :type z_scale: float :param remove_genes: List of regex patterns to filter the 'gene' column, :py:attr:`ovrlpy.io.MERFISH_CTRLS` by default. :type remove_genes: collections.abc.Collection[str], optional :rtype: pandas.DataFrame